charge distribution
Equivariant Machine Learning Interatomic Potentials with Global Charge Redistribution
Maruf, Moin Uddin, Kim, Sungmin, Ahmad, Zeeshan
Machine learning interatomic potentials (MLIPs) provide a computationally efficient alternative to quantum mechanical simulations for predicting material properties. Message-passing graph neural networks, commonly used in these MLIPs, rely on local descriptor-based symmetry functions to model atomic interactions. However, such local descriptor-based approaches struggle with systems exhibiting long-range interactions, charge transfer, and compositional heterogeneity. In this work, we develop a new equivariant MLIP incorporating long-range Coulomb interactions through explicit treatment of electronic degrees of freedom, specifically global charge distribution within the system. This is achieved using a charge equilibration scheme based on predicted atomic electronegativities. We systematically evaluate our model across a range of benchmark periodic and non-periodic datasets, demonstrating that it outperforms both short-range equivariant and long-range invariant MLIPs in energy and force predictions. Our approach enables more accurate and efficient simulations of systems with long-range interactions and charge heterogeneity, expanding the applicability of MLIPs in computational materials science.
- North America > United States > Texas > Lubbock County > Lubbock (0.04)
- Asia > South Korea > Gyeonggi-do > Suwon (0.04)
Nutmeg and SPICE: Models and Data for Biomolecular Machine Learning
Eastman, Peter, Pritchard, Benjamin P., Chodera, John D., Markland, Thomas E.
We describe version 2 of the SPICE dataset, a collection of quantum chemistry calculations for training machine learning potentials. It expands on the original dataset by adding much more sampling of chemical space and more data on non-covalent interactions. We train a set of potential energy functions called Nutmeg on it. They use a novel mechanism to improve performance on charged and polar molecules, injecting precomputed partial charges into the model to provide a reference for the large scale charge distribution. Evaluation of the new models shows they do an excellent job of reproducing energy differences between conformations, even on highly charged molecules or ones that are significantly larger than the molecules in the training set. They also produce stable molecular dynamics trajectories, and are fast enough to be useful for routine simulation of small molecules.
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- North America > United States > New York > New York County > New York City (0.04)
- North America > United States > California > Santa Clara County > Stanford (0.04)
- North America > United States > California > Santa Clara County > Palo Alto (0.04)
Generative Models for Simulation of KamLAND-Zen
Fu, Z., Grant, C., Krawiec, D. M., Li, A., Winslow, L.
The next generation of searches for neutrinoless double beta decay (0{\nu}\b{eta}\b{eta}) are poised to answer deep questions on the nature of neutrinos and the source of the Universe's matter-antimatter asymmetry. They will be looking for event rates of less than one event per ton of instrumented isotope per year. To claim discovery, accurate and efficient simulations of detector events that mimic 0{\nu}\b{eta}\b{eta} is critical. Traditional Monte Carlo (MC) simulations can be supplemented by machine-learning-based generative models. In this work, we describe the performance of generative models designed for monolithic liquid scintillator detectors like KamLAND to produce highly accurate simulation data without a predefined physics model. We demonstrate its ability to recover low-level features and perform interpolation. In the future, the results of these generative models can be used to improve event classification and background rejection by providing high-quality abundant generated data.
- North America > United States > Massachusetts > Middlesex County > Cambridge (0.14)
- Europe > United Kingdom (0.14)
- North America > United States > California > San Diego County > San Diego (0.04)
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An Introduction to Poisson Flow Generative Models
Generative AI models have made great strides in the past few years. Physics-inspired Diffusion Models have ascended to state-of-the-art performance in several domains, powering models like Stable Diffusion, DALL-E 2, and Imagen. Researchers from MIT have recently unveiled a new physics-inspired generative model, this time drawing inspiration from the field of electrodynamics. This new type of model - the Poisson Flow Generative Model (PFGM) - treats the data points as charged particles. By following the electric field generated by the data points, PFGMs can create entirely novel data. PFGMs constitute an exciting foundation for new avenues of research, especially given that they are 10-20 times faster than Diffusion Models on image generation tasks, with comparable performance. In this article, we'll take a high-level look at PFGM theory before learning how to train and sample with PFGMs. After that we'll take another look at the theory, this time perfoming a deep dive starting from first principles. Then we'll look at how PFGMs stack up to other models and other results before ending with some final words. Several families of generative models have evolved throughout the development of AI. Other approaches, like GANs, cannot explicitly calculate likelihoods, but can generate very high-quality samples.
Molecular Dynamics with Neural-Network Potentials
Gastegger, Michael, Marquetand, Philipp
Molecular dynamics simulations are an important tool for describing the evolution of a chemical system with time. However, these simulations are inherently held back either by the prohibitive cost of accurate electronic structure theory computations or the limited accuracy of classical empirical force fields. Machine learning techniques can help to overcome these limitations by providing access to potential energies, forces and other molecular properties modeled directly after an electronic structure reference at only a fraction of the original computational cost. The present text discusses several practical aspects of conducting machine learning driven molecular dynamics simulations. First, we study the efficient selection of reference data points on the basis of an active learning inspired adaptive sampling scheme. This is followed by the analysis of a machine-learning based model for simulating molecular dipole moments in the framework of predicting infrared spectra via molecular dynamics simulations. Finally, we show that machine learning models can offer valuable aid in understanding chemical systems beyond a simple prediction of quantities.
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- Europe > United Kingdom > England > Oxfordshire > Oxford (0.04)
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Quantum-chemical insights from interpretable atomistic neural networks
Schütt, Kristof T., Gastegger, Michael, Tkatchenko, Alexandre, Müller, Klaus-Robert
With the rise of deep neural networks for quantum chemistry applications, there is a pressing need for architectures that, beyond delivering accurate predictions of chemical properties, are readily interpretable by researchers. Here, we describe interpretation techniques for atomistic neural networks on the example of Behler-Parrinello networks as well as the end-to-end model SchNet. Both models obtain predictions of chemical properties by aggregating atom-wise contributions. These latent variables can serve as local explanations of a prediction and are obtained during training without additional cost. Due to their correspondence to well-known chemical concepts such as atomic energies and partial charges, these atom-wise explanations enable insights not only about the model but more importantly about the underlying quantum-chemical regularities. We generalize from atomistic explanations to 3d space, thus obtaining spatially resolved visualizations which further improve interpretability. Finally, we analyze learned embeddings of chemical elements that exhibit a partial ordering that resembles the order of the periodic table. As the examined neural networks show excellent agreement with chemical knowledge, the presented techniques open up new venues for data-driven research in chemistry, physics and materials science.